In this study, we focused on protein cysteine oxidation. First we utilized diamide as a
tool to approach thiol-specific oxidation, treating HeLa cells with high-dose diamide for
short time to survey its property of stimulating protein thiolation and effect on
antioxidant responses. Next we applied this diamide-induced thiolation method to figure
out the antioxidant role of sulfiredoxin. Besides its well-known function of reducing
hyperoxidized peroxiredoxin, by utilizing SRXN1 KO HAP-1 cell and SRXN1
over-expressed HEK cell as models, we found that sulfirdoxin might prevent cells from
diamide-induced protein thiolations, indicating a more essential role of sulfiredoxin, and
indicated there was possibly a compensatory activation of other antioxidant systems to
compromise sulfiredoxin’s function. Meanwhile, about thiol-modification detections,
we ameliorated the PEG-switch method, finding the optimal labeling condition of
PEG-maleimide, and applied this method to estimate protein redox status quantitatively.
Based on the labeling method, we proposed a scoring system that reflected the redox
status, and utilizing this method on investigating in cellulo oxidation models such as
insulin-triggered PTP1B oxidation.
In perspective, we modified the diamide treatment, and utilizing it to indicate an
unreported protective function of sulfiredoxin under thiol-specific attacks, implicating a
more essential role in antioxidant response. Additionally, we proposed a quantitative
display method of protein redox status, including the optimal tagging condition,
calculation and a scoring system. This method was focusing on cysteine oxidation,
could be operated easily and fast, and the most importantly, it could describe redox
status in a quantitative and comparable manner.
Figures
Figure 1. Diamide induced reversible thiolations in HeLa cells
(A) Diamide structure. (Picture credited to Sigma Aldrich website).
(B) Experimental pipeline of resin-assisted capture (RAC). Cells treated with diamide
were lysasted and harvested. Free cysteine thiol was alkylated by 100 mM IAA
followed by ammonium sulfate precipitation. Oxidized cysteine residue was reduced by
100 mM DTE, and the nascent exposure thiol was captured by thiolpropyl sepharose
with disulfide formation, so that pulled down oxidized proteins. Input and elution
fractions of RAC were analyzed with SDS-PAGE and Coomassie blue staining.
(C) HeLa cells were treated with 0 – 5 mM diamide for 5 minutes, and the lysates were
applied to RAC.
(D) HeLa cells were treated with 5 mM diamide for 5 min, and then washed in fresh
medium and cultured for 5 – 60 min for recovering. Cell lysates were subjected to RAC.
Ctrl: control group, 5D: 5 mM diamide treatment for 5 min, R5 – R60: recovering for 5
– 60 min.
Figure 2. Thiolated targets of diamide treatment
HeLa cells were treated with 5 mM diamide for 5 min, recovered for 30 min, and
then analyzed with RAC. The input, flow-through (FT) and elution fractions of RAC
were analyzed by immunoblotting. Hsp90: heat shock protein 90, PKM1/2: pyruvate
kinase M 1/2, Prx: peroxiredoxin. Ctrl: control group, 5D: 5 mM diamide treatment for
5 min, 5DR: recovered for 30 min.
Figure 3. Diamide affected redox status of glutathione, NADH and NADPH
HeLa cells were treated with 5 mM diamide for 5 min, and then extracted metabolites
from cultured cell by 66% acetonitrile. Samples were applied to LC-MS analysis to
verified metabolites including ADP, ATP, glutathione (GSH), glutathione disulfide
(GSSG), NADH, NAD+, and NADPH, and NADP+. The LC peaks were integrated by
Data Analysis® software, and normalized with the measurement of RAC control group.
The statistical significance between control and diamide-treated groups (3 repeats) was
examined by one-tail t-test. *: p-value < 0.05. **: p-value < 0.01.
Figure 4. Diamide triggered Nrf2 translocation and downstream gene expressions
(A) HeLa cells were treated with 5 mM diamide for 5 min and recovered for 30 min.
Cells were harvested and objected to fractionation. Nrf2 was probed by immunoblotting,
while GAPDH and Histone H3 were utilized as cytosolic and nuclear markers. Noted
that the predicted molecular weight of Nrf2 is 72 kD for cytosolic and 120 kD for
nuclear form according to Abcam® datasheet
http://www.abcam.com/nrf2-antibody-ab137550.html#description_images_10).
(B) Diamide-treated and recovered cells were applied to immunofluorescence of Nrf2
(green), while DAPI (blue) was used to point out cell nucleus. Nrf2 translocated into
nucleus after diamide treatment.
(C) HeLa cells were treated 5 mM diamide for 5 min, and recovered for 5 to 30 min.
The transcription of Nrf2 downstream gene SOD2, NQO1 and GSTP1 were analyzed
by RT-PCR, whileβ-actin was used as internal control.
Figure 5. Knockout of SRXN1 led to truncation of sulfiredoxin
(A) SRXN1 in hyploid HAP-1 cells were edited by Crispr-Cas9 system, causing 1bp
adenosine insertion in exon 2. The parental and SRXN1-KO cells were supplied by
Horizon®. For confirming the insertion, genomic DNA was extracted from both cells as
template, and a 200 bp fragment containing the edited site was amplified by PCR and
subjected to sequencing.
(B) The insertion resulted in a frame shift while translation, leading to a truncation of
sulfiredoxin from I79 residue, which supposed to lose the active site of sulfiredoxin
(G98-R101). Protein structures, molecular weights and pI value were predicted by
ExPasy tool (https://swissmodel.expasy.org/).
Figure 6. Diamide-induced thiolations increased in SRXN1 KO HAP-1 cell
(A) Parental and SRXN1-KO HAP-1 cells were treated with 1 and 5 mM diamide for 5
min, and allowed to MTT assay. The results were normalized by the measurements of
control groups. The differences between parental and KO cells were analyzed by
one-tail t-test. *: p-value < 0.05.
(B) Parental and SRXN1 KO HAP-1 cells were treated with 5 mM diamide for 5 min
and elution fractions were analyzed by SDS-PAGE. Ctrl: control group; 5D: 5 mM
diamide treatment for 5 min; 5DR: recovering for 30 min.
(C) RAC samples were subjected to immunoblotting. Several targets that found in HeLa
cell model, including Hsp90, pyruvate kinase (PKM1/2), aldolase, and GAPDH, were
also confirmed in HAP-1 cell.
Figure 7. Thiolation of antioxidant enzymes increased in SRXN1 KO HAP-1 cell
Identified antioxidant enzymes in RAC samples, including peroxiredoxin (Prx),
thioredoxin 2 (Trx2), glutathione reductase (GR), were analyzed by immunoblotting,
while GAPDH was used as loading control. Ctrl: control group; 5D: 5 mM diamide
treatment for 5 min; 5DR: recovery for 30 min.
Figure 8. Diamide-induced protein glutathionylation and glutathione oxidation increased in SRXN1 KO cell
(A) Lysate of diamide-treated HAP-1 cells were analyzed by anti-glutathione (GSH)
immunoblotting for examing protein glutathionylation levels. β-ME: samples that
treated with β-mercaptoethanol in SDS-PAGE. The arrow indicates the glutathionylated
proteins, which able to be reduced by β-ME.
(B) The metabolite was extracted from HAP-1 cells by 66% acetonitrile, and the
samples were allowed to LC-MS analysis. The LC peak of oxidized glutathione (GSSG)
was integrated by Data Analysis® software, and was normalized by the measurement of
control group. The differences among groups, including diamide-treated (DA) and
Figure 9. Activity of thioredoxin reductase increased in SRXN1 KO cell
(A) Lysates of diamide-treated and recovered HAP-1 cells were allowed to anti-Prx
immunoblotting. Diamide treatment induced Prx dimerization in SRXN-1 KO cell,
which was reducible by adding β-mercaptoethanol.
(B) Lysate of parental and SRXN1-KO HAP-1 cells were subjected to immunoblotting
for examining the expression level of antioxidative enzymes, including thioredoxin 1
(Trx1), thioredoxin 2 (Trx2), thioredoxin reductase (TRR) and peroxiredoxin (Prx).
(C) Lysates of both cells were applied to Ellman’s assay for analyzing the activity of
30 sec., reading = 20. Measurements were normalized by protein amount (quantitated
by BCA quantification), and the differences between parental and SXN1-KO cells were
analyzed by one-tail t-test. **: p-value < 0.01.
Figure 10. Diamide induced Srx dimerization in SRXN1 over-expressed HEK cell
(A) FLAG-SRXN1 overexpressing HEK cells were treated with 5 mM diamide for 5min, and examined by anti-Srx immunoblotting with or without β-mercaptoethanol
(GAPDH as loading control). Dimerization was observed in diamide-treated group,
which could be reduced by β-mercaptoethanol.
(B) Diamide-treated SRXN1 overexpressing HEK cells were analyzed by anti-FLAG
immunoblotting.
(C) Sulfiredoxin was immunoprecipitated by anti-Srx, and analyzed the potential
binding partners by immunoblotting, whereas there were no signals of peroxiredoxin
(Prx), thioredoxin 1 (Trx1), and thioredoxin 2 (Trx2) be observed.
(D) Sulfredoxin immunoprecipitated by anti-Srx was examined by anti-FLAG and
anti-GSH. Dimerization increased after diamide treatment and could be reduced by
β-mercaptoethanol, whereas no glutathionylation was observed.
Figure 11. Sulfiredoxin dimerization was found in mitochondria
(A) FLAG-SRXN1 overexpressing HEK cells were subjected to fractionation. The
cytosolic and mitochondrial fractions were examined by anti-Srx immunoblotting, with
or without β-mercaptoethanol. SOD2 and GAPDH were used as mitochondrial and
cytosolic marker.
(B) FLAG-SRXN1 overexpressed HEK cell was treated with H2O2 0 - 10 mM for 10
min, and examined by anti-Srx immunoblotting with or without β-mercaptoethanol.
Figure 12. Hypothetic mechanism of sulfiredoxin in diamide-induced oxidation
In hypothesis, sulfiredoxin is sensitive to mitochondrial H2O2 stress in general. While
treated with diamide, cytosolic sulfiredoxin dimerizes for scavenging the oxidative
stress. When SRXN1 KO, both Trx and GSH systems become more active to
compensate the function of sulfiredoxin.
Fig. 13. Reaction of PEG-maleimide with protein cysteine residues causing mobility shift on SDS-PAGE
(A) Cultured cells were lysed and precipitated with ammonium sulfate. The pellet was
dissolved with lysis buffer, adding 1 mg/mL PEG-maleimide for tagging at 37°C for 30
minutes and then quenched with 2x sample buffer containing 4% β-mercaptoethanol
immediately. The sample was applied to SDS-PAGE and immunoblotting.
(B) In principal, exposed cysteine residues with low pKa can be labeled with
PEG-maleimide, thus resulting in mobility shift on SDS-PAGE. When protein is
PEG-maleimide. The oxidative status of specific protein can be detected and quantified
by calculating the ratio of shifted to nonshifted signals.
Fig. 14. Protein labeling efficiency with PEG-maleimide, PEG-vinyl sulfone
(A) HeLa cell lysate was incubated with PEG-maleimide at concentrations of 0, 0.01,0.1, 1 mg/mL at 37 °C for 30 min, and followed by immunoblotting with
(B) Cell lysate prepared from different cell lines was incubated with PEG-maleimide at
concentrations of 0 - 1 mg/mL at 37 °C for 30 min, and followed by immunoblotting
with anti-peroxiredoxin.
(C) HeLa cell lysate was precipitated with saturated ammonium sulfate solution in 1:4.
The pellet was dissolved by lysis buffer containing PEG-maleimide at concentrations of
0 - 1 mg/mL, and incubated at 37 °C for 30 min, followed by immunoblotting with
anti-peroxiredoxin.
(D) HeLa cell lysate was precipitated with ammonium sulfate, and dissolved the pellet
with PEG-vinyl sulfone at concentrations of 0 – 1 mg/mL, incubating at 37 °C for 30
min followed by immunoblotting with anti-peroxiredoxin.
Note: There are four cysteine residues in human Prx1.
Fig. 15. Targets of PEG-maleimide labeling
HeLa cell lysate was incubated with m-PEG-maleimide at concentration of 0 -1
mg/mL at 37 °C for 30 min and followed by immunoblotting.
(A) Caspase 3 and caspase 9, which containing low-pKa cysteine residues, could be
labeled by PEG-maleimide and caused a band shift.
Note: there are 7 cysteine residues in procaspase 3 and 13 in procaspase 9.
(B) Examples of positive shifted signal following PEG-maleimide treatment. HDAC6:
histone deacetylase 6; FA syn: fatty acid synthase; Bcl-2: apoptosis regulator Bcl-2;
nm23: nucleoside diphosphate kinase A; PTP1B: protein tyrosine phosphate 1 B.
(C) Examples of negative shifted signal following PEG-maleimide treatment. GR:
glutathione reductase; CamKII; calmodulin-dependent protein kinase II; NFκB: nuclear
factor κB; DTYMK: deoxythymidylate kinase.
Fig. 16. Detection and scoring of in vitro oxidized proteins
HeLa cell lysate that in vitro treated with H2O2 10 mM for 1 h was precipitated
immediately with ammonium sulfate. The pellet was dissolved with lysis buffer
containing 1 mg/mL PEG-maleimide, incubated at 37 °C for 30 min, and examined by
immunoblotting. Peroxiredoxin (Prx), prohibitin (PHB), and heat shock protein 27
(Hsp27) could be labeled by PEG-maleimide and caused band shift. Meanwhile, there
was no shifted signals in samples with H2O2 treatment, supposed that the active cysteine
residues were completely blocked with oxidative modifications.
(A) Immunoblot of Prx.
(B) Immunoblot of Hsp27. There is only one cysteine residue in Hsp 27.
(C) Immunoblot of PHB. There is only one cysteine residue in PHB. Scoring was
followed the formula: Redox!score! = !f0!×!20! + !f1!×!21!+!. . . +!fn!×!2n.
Fig. 17. Quantitation of in cellulo H
2O
2-induced Prx oxidation in HEK cell
(A) HEK cells were treated with H2O2 at concentration of 0, 1, 10 mM for 10 min inwas dissolved and incubated with PEG-maleimide for labeling (1 mg/mL, 37 °C, 30
min). Samples were examined by immunoblotting with anti-peroxiredoxin,
(B) HEK cells were treated with H2O2 at concentration of 0, 1, 10 mM for 10 min in
cellulo, than lysed with lysis buffer containing PEG-maleimide for labeling (1 mg/mL,
37 °C, 30 min). Samples were examined by immunoblotting with anti-peroxiredoxin.
(C) Signals of immunoblotting of precipitated samples (as shown in Fig. 17A) were
integrated by Quanti-Scan for quantitation. The percentage of shifted and nonshifted
signals, and the ratio of shifted to nonshifted signals were shown as the bar graphs. The
ratio of shifted 2 to nonshifted were significantly increasing, whereas shifted 3 was
totally disappeared after H2O2 treatment.
Statistic analysis that comparing the results of 1 and 10 mM to 0 mM in 3-repeat data
was done with one-tail t-test. *: p-value < 0.05; **: p-value < 0.01.
Fig. 18. Quantitation of in cellulo H
2O
2-induced oxidation of Hsp27 in HEK cell
(A) HEK cells were treated with H2O2 at concentration of 0, 1, 10 mM for 10 min incellulo, and the lysate was precipitated with ammonium sulfate immediately. The pellet
was dissolved and incubated with PEG-maleimide for labeling (1 mg/mL, 37 °C, 30
min). Samples were examined by immunoblotting with anti-Hsp27.
(B) HEK cells were treated with H2O2 at concentration of 0, 1, 10 mM for 10 min in
cellulo, than lysed with lysis buffer containing PEG-maleimide for labeling (1
mg/mL, 37 °C, 30 min). Samples were examined by immunoblotting with anti-Hsp27.
(C) Signals of immunoblotting of Hsp27 (as shown in Fig. 18A) were integrated by
Quanti-Scan for quantitation. The percentage of shifted and nonshifted signals, and the
ratio of shifted to nonshifted signals were shown as the bar graphs. Statistic analysis of
3-repeat data was done with one-tail t test. *: p-value < 0.05.
Fig. 19. Quantitation of insulin-induced oxidized PTP1B in HeLa cells
(A) HeLa cells were treated with 10 ng/mL insulin for 0, 5 and 10 min, and the lysate
containing 1 mg/ml PEG-maleimide, and incubated at 37 °C for 30 min. Samples were
examined by immunoblottng using anti-PTP1B antibody. Arrow 0: nonshifted; 1:
shifted band (with 1 m-PEG tag); P: shifted band which tagged in several cysteine
residues so that with a high molecular weight.
(B) HeLa cells were treated with 10 ng/mL insulin for 0, 5 and 10 min. The cells were
immediately lysed with lysis buffer containing 1 mg/ml PEG-maleimide. The cell lysate
was incubated at 37 °C for 30 min and then examined by immunoblottng using
anti-PTP1B antibody. Arrow 0: nonshifted; 1-2: shifted bands.
(C) The immunoblotting signals (as shown in Fig. 19B) were quantitated by QuantiScan.
The percentage of shifted and nonshifted signals and the ratio of shifted to nonshifted
were shown as bar graph. Statistics analysis of 2-repeat data was done with one-tail t
test. *: p-value <0.05; **: p-value < 0.01.
Note: There are 10 cysteine residues in human PTP1B.
Tables
Accession Description Mass Score
(Parental)
Score (KO)
ESTD_HUMAN S-formylglutathione hydrolase OS=Homo sapiens GN=ESD
PE=1 SV=2 31442 317 294
GPX7_HUMAN Glutathione peroxidase 7 OS=Homo sapiens GN=GPX7 PE=1
SV=1 20983 36 -
GSHR_HUMAN Glutathione reductase, mitochondrial OS=Homo sapiens
GN=GSR PE=1 SV=2 56221 51 132
GSTK1_HUMAN Glutathione S-transferase kappa 1 OS=Homo sapiens
GN=GSTK1 PE=1 SV=3 25480 24 -
GSTO1_HUMAN Glutathione S-transferase omega-1 OS=Homo sapiens
GN=GSTO1 PE=1 SV=2 27548 84 48
GSTP1_HUMAN Glutathione S-transferase P OS=Homo sapiens GN=GSTP1
PE=1 SV=2 23341 954 763
PRDX1_HUMAN Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1 22096 761 345 PRDX2_HUMAN Peroxiredoxin-2 OS=Homo sapiens GN=PRDX2 PE=1 SV=5 21878 456 220
PRDX3_HUMAN Thioredoxin-dependent peroxide reductase, mitochondrial
OS=Homo sapiens GN=PRDX3 PE=1 SV=3 27675 110 37 PRDX4_HUMAN Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1 30521 158 90
PRDX5_HUMAN Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5
PE=1 SV=4 22073 150 51
PRDX6_HUMAN Peroxiredoxin-6 OS=Homo sapiens GN=PRDX6 PE=1 SV=3 25019 361 172
TMX1_HUMAN Thioredoxin-related transmembrane protein 1 OS=Homo
sapiens GN=TMX1 PE=1 SV=1 31771 204 168
TRXR1_HUMAN Thioredoxin reductase 1, cytoplasmic OS=Homo sapiens
GN=TXNRD1 PE=1 SV=3 70862 87 30
TXND5_HUMAN Thioredoxin domain-containing protein 5 OS=Homo sapiens
GN=TXNDC5 PE=1 SV=2 47599 71 135
Table 1. Diamide-induced thiolated antioxidant enzymes in HAP-1 cell
RAC elution fractions of diamide-treated partental and SRXN1 KO HAP-1 cells were
subjected to LC-MS for protein identification. Antioxidant enzymes that were identified
are listed here. The complete dataset is listed in Appendix Table S1.
Accession Description Mass Score ACTG_HUMAN Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1 SV=1 41766 348 EF2_HUMAN Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4 95277 166
HS90A_HUMAN Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1
PE=1 SV=5 84607 145
H2A1B_HUMAN Histone H2A type 1-B/E OS=Homo sapiens GN=HIST1H2AB PE=1
SV=2 14127 137
H2B1J_HUMAN Histone H2B type 1-J OS=Homo sapiens GN=HIST1H2BJ PE=1 SV=3 13896 120 S10A9_HUMAN Protein S100-A9 OS=Homo sapiens GN=S100A9 PE=1 SV=1 13234 115
H2B1B_HUMAN Histone H2B type 1-B OS=Homo sapiens GN=HIST1H2BB PE=1
SV=2 13942 114
TCPQ_HUMAN T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1
SV=4 59583 107
DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3 331569 85 CASPE_HUMAN Caspase-14 OS=Homo sapiens GN=CASP14 PE=1 SV=2 27662 84
PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapiens GN=PAICS PE=1
SV=3 47049 82
ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3 120762 79
TGM1_HUMAN Protein-glutamine gamma-glutamyltransferase K OS=Homo sapiens
GN=TGM1 PE=1 SV=4 89730 75
PLAK_HUMAN Junction plakoglobin OS=Homo sapiens GN=JUP PE=1 SV=3 81693 66
TCPE_HUMAN T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5
PE=1 SV=1 59633 63
EF1G_HUMAN Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1
SV=3 50087 57
ANXA2_HUMAN Annexin A2 OS=Homo sapiens GN=ANXA2 PE=1 SV=2 38580 51 S10A8_HUMAN Protein S100-A8 OS=Homo sapiens GN=S100A8 PE=1 SV=1 10828 49
KPRP_HUMAN Keratinocyte proline-rich protein OS=Homo sapiens GN=KPRP PE=1
SV=1 64093 47
TCPD_HUMAN T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1
SV=4 57888 46
RS16_HUMAN 40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2 16435 45 1433E_HUMAN 14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1 29155 43
PPIA_HUMAN Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA
PE=1 SV=2 18001 43
LYSC_HUMAN Lysozyme C OS=Homo sapiens GN=LYZ PE=1 SV=1 16526 43 H3C_HUMAN Histone H3.3C OS=Homo sapiens GN=H3F3C PE=1 SV=3 15204 42
SERA_HUMAN D-3-phosphoglycerate dehydrogenase OS=Homo sapiens
GN=PHGDH PE=1 SV=4 56614 41
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X
PE=1 SV=3 73198 40
RL27A_HUMAN 60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1
SV=2 16551 39
SND1_HUMAN Staphylococcal nuclease domain-containing protein 1 OS=Homo
sapiens GN=SND1 PE=1 SV=1 101934 39
RL26L_HUMAN 60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1
PE=1 SV=1 17246 39
HNRPL_HUMAN Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens
GN=HNRNPL PE=1 SV=2 64092 37
NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 32555 36
CSDE1_HUMAN Cold shock domain-containing protein E1 OS=Homo sapiens
GN=CSDE1 PE=1 SV=2 88829 35
TRFL_HUMAN Lactotransferrin OS=Homo sapiens GN=LTF PE=1 SV=6 78132 34
ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1
PE=1 SV=2 83776 33
RL30_HUMAN 60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2 12776 31
TCPH_HUMAN T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1
SV=2 59329 30
SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1
PE=1 SV=2 27728 30
RL18A_HUMAN 60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1
SV=2 20749 30
Table 2. Diamide-induced sulfiredoxin disulfide-forming targets
FLAG-SRXN1 over-expressing HEK cells were treated with diamide. The dimer of
sulfiredoxin was pulled down in reduced condition, and eluted with β-mercaptoehtanol
to release the possible disulfide-binding partners. Proteins that only found in
diamide-treated group are listed here, and the complete dataset is listed in Appendix
Table S2.
References
[1] R.J. Mailloux, S.L. McBride, M.E. Harper, Unearthing the secrets of mitochondrial ROS and glutathione in bioenergetics, Trends Biochem Sci 38 (2013) 592-602.
[2] D.W. Bak, E. Weerapana, Cysteine-mediated redox signalling in the mitochondria, Mol Biosyst 11 (2015) 678-697.
[3] Y. Kayama, U. Raaz, A. Jagger, M. Adam, I.N. Schellinger, M. Sakamoto, H.
Suzuki, K. Toyama, J.M. Spin, P.S. Tsao, Diabetic Cardiovascular Disease Induced by Oxidative Stress, Int J Mol Sci 16 (2015) 25234-25263.
[4] L.A. Pham-Huy, H. He, C. Pham-Huy, Free radicals, antioxidants in disease and health, Int J Biomed Sci 4 (2008) 89-96.
[5] S. Reuter, S.C. Gupta, M.M. Chaturvedi, B.B. Aggarwal, Oxidative stress,
inflammation, and cancer: how are they linked?, Free Radic Biol Med 49 (2010) 1603-1616.
[6] J.M. Mates, C. Perez-Gomez, I. Nunez de Castro, Antioxidant enzymes and human diseases, Clin Biochem 32 (1999) 595-603.
[7] C. Espinosa-Diez, V. Miguel, D. Mennerich, T. Kietzmann, P. Sanchez-Perez, S.
Cadenas, S. Lamas, Antioxidant responses and cellular adjustments to oxidative stress, Redox Biol 6 (2015) 183-197.
[8] S. Garcia-Santamarina, S. Boronat, E. Hidalgo, Reversible cysteine oxidation in hydrogen peroxide sensing and signal transduction, Biochemistry 53 (2014) 2560-2580.
[9] C. Hwang, A.J. Sinskey, H.F. Lodish, Oxidized redox state of glutathione in the endoplasmic reticulum, Science 257 (1992) 1496-1502.
[10] Z.A. Wood, E. Schroder, J. Robin Harris, L.B. Poole, Structure, mechanism and regulation of peroxiredoxins, Trends Biochem Sci 28 (2003) 32-40.
[11] T.D. Oberley, E. Verwiebe, W. Zhong, S.W. Kang, S.G. Rhee, Localization of the thioredoxin system in normal rat kidney, Free Radic Biol Med 30 (2001) 412-424.
[12] H.S. Marinho, C. Real, L. Cyrne, H. Soares, F. Antunes, Hydrogen peroxide sensing, signaling and regulation of transcription factors, Redox Biol 2 (2014) 535-562.
[13] E.A. Veal, Z.E. Underwood, L.E. Tomalin, B.A. Morgan, C.S. Pillay,
Hyperoxidation of Peroxiredoxins: Gain or Loss of Function?, Antioxid Redox Signal 28 (2018) 574-590.
[14] Z.A. Wood, L.B. Poole, P.A. Karplus, Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling, Science 300 (2003) 650-653.
[15] A. Holmgren, C. Johansson, C. Berndt, M.E. Lonn, C. Hudemann, C.H. Lillig, Thiol redox control via thioredoxin and glutaredoxin systems, Biochem Soc Trans 33 (2005) 1375-1377.
[16] A.A. Turanov, D. Su, V.N. Gladyshev, Characterization of alternative cytosolic forms and cellular targets of mouse mitochondrial thioredoxin reductase, J Biol Chem 281 (2006) 22953-22963.
[17] Y.M. Go, D.P. Jones, Redox control systems in the nucleus: mechanisms and
[17] Y.M. Go, D.P. Jones, Redox control systems in the nucleus: mechanisms and