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Regulation of K12 Ker atin Gene in Cor neal Epithelial Cells

I-Jong Wang†, Chia-Yang Liu¶, Carlson Eric¶, Fung-Rong Hu†, Winston W.-Y. Kao¶

†Department of Ophthalmology, National Taiwan University Hospital, 7, Chung-Shan South Road, Taipei 100, Taiwan

Department of Ophthalmology, University of Cincinnati Medical Center, Health Professions Building, Suite 350, ML0527, Eden and Bethesda Avenues, Cincinnati,

Ohio 45267-0527, USA,

Running title: K12 Keratin Gene in Corneal Epithelial Cells

Correspondence and reprint requests should be addressed to W. W. -Y. Kao.

Department of Ophthalmology, University of Cincinnati Medical Center, Health

Professions Building, Suite 350, ML0527, Eden and Bethesda Avenues, Cincinnati,

Ohio. TEL: (513) 558-5151, FAX: (513) 558-3108 E-mail: [email protected]

(2)

INTRODUCTION

Keratins are a group of water-insoluble proteins that form 10 nm intermediate filaments in

all epithelial cells. 1

About 30 different keratin molecules have been identified and can be

divided into acidic and basic neutral subfamilies in tissue-specific manners.1-4

In vivo, a

basic keratin is usually co-expressed and "paired" with a particular acidic keratin. 1;3-5

According to their mode of expression and their association with progressively more

complicated structures, the keratin pairs can be divided into several categories: (1) keratins

of the simple epithelia include the K8/K18 pair and several small MW keratins; (2) keratins

expressed by the basal cells of all stratified squamous epithelia, K5/K14 pair; (3) kertins

expressed by the suprabasal cells of all stratified epithelia that become hyperplastic due to

diseased or wound conditions or tissue culture stimuli, the K6/K16 pair; and (4)keratins

expressed by suprabasal cells of normally differentiating stratified squamous epithelia.6

For

example, expression of the K12/K3 pair has been regarded as a marker for cornea-type

epithelial differentiation.5;7;8

The K12/K3 intermediate filaments are vital for corneal

epithelial cell integrity, phsycal stability and rigidity. Mutations of K12 and K3 genes in

human, and ablation of K12 gene via gene targeting in mice result in fragile corneal

epithelium, a clinical manifestation characteristics of Meesmann’s corneal dystrophy.{9

}10

Although K12/K3 pair is considered as the cornea-type differentiation marker, recent

evidence indicates that K3 can be expressed in several tissues other than the corneal

epithelium.7

}11

(3)

demonstrated that the expression of K12 is restricted to the corneal epithelium.7;12-17

The expression of tissue-specific keratin was dependent on the on and/or

turn-off of a variety of genes.18-20

Many of these keratinocytes genes are regulated at the

transcriptional levels in a coordinate manner during keratinocyte differentiation.21;22

Most

of these genes are also regulated in an independent manner by at least one regulatory agent

and the gene regulatory regions do not appear to be conserved. 21

The fine-tuned regulation

of certain keratin genes has been shown in pairwise (e.g., K1-K10, K3-K12, K5-K14, and

K6-K16) and some of these pairs are expressed reciprocally (e.g., K3-K12 and

K5-K14).23-26

There are several transcriptional factors known for the regulation of keratin gene

expression. For example, AP-2 and SP-1have been shown to be able to regulate the

expression of K1, K3, K5, K6, K12, and K14.6;27-29

Furthermore, the regulation of keratin

gene expression always needs the combination of several transcription factors to express

tissue specificity. 6;27-29

We have attempted, but failed to identify the cornea epithelial, K12,

cell-specific promoter using conventional in vitro transfection of cultured corneal epithelial

cells and in vivo transgenic mice.30

But recently, we successfully used Gene Gun,

particle-mediated gene transfer, to deliver K12 transgenes to corneal epithelial cells in vivo.30

We

observed that 2.5 kb DNA fragment 5’ flanking Krt1.12 possibly contained corneal

epithelial cell-specific regulatory cis-DNA elements and PAX 6 is an important

(4)

constructs with Gene Gun analysis as well as DNase I footprinting and electrophoretic

motility shift assays (EMSA) were performed to elucidate the regulation of tissue

(5)

MATERIALS AND METHODS Plasmids.

Two plasmid DNA constructs i.e., pCMVβ and pNASSβ (Clontech, Palo Alto, CA ), were used as control reporter genes. A series of keratin 12 promoter fragments were

prepared and cloned into pNASSβ vector as shown in Fig. 1. The 2.5 kb Krt1.12 promoter construct was derived by Nru/XhoI cut from a 5.0 kb Krt1.12 promoter

construct and ligated to Ehe/XhoI cut pNASSβ. The 2.0 kb Krt1.12 promoter was derived by SacI/XhoI cut from a 2.5 KB Krt1.12 promoter and ligated into EcoRI/XhoI

cut pNASSβ using an Eco/Asc/Sac adaptor. A 4.5 kb EcoRI/HindIII fragment from 0.6 KB containing the β-gal reporter driven by the 3’ 600 bp of the K12 promoter was ligated to a 3.7 kb EcoRI/HindIII fragment from 2.0 kb Krt1.12 constructs containing

the vector backbone of pNASSβ and 5’ 1000 bp of the K12 promoter. The resulting a 2 kb 0.4 kb vector is identical to 2.0 kb with the exception that is missing 400 bp of the

K12 promoter starting at the 975 bp EcoRI site and extending 400 bp 3’ toward the 3’

end of the promoter. The 2 kb 0.6 kb and 2 kb 0.8 kb construct were produced by

the same method as 2 KB 0.4 kb construct. The 3’ ends of these constructs were

created by digestion with XhoI and corresponded to position +40 on the transcriptional

initiation site. The fragments were cloned in the sense orientation about the β

-galactosidase gene, and constructs were numbered according to the sequence positions

(6)

from 2.5 kb Krt1.12 constructs, and all constructs were confirmed by DNA sequencing.

All of these construct and primers used for polymerase chain reaction were shown in

Table1.

In vivo Gene Tr ansfer by Gene Gun.

Plasmid DNA purified by Qiagen columns (Qiagen, Chatsworth, CA) was coated onto gold particles of 0.6 µm, 1.0 µm or 1.6 µm (5 µg DNA per mg of gold particles) according to the procedures recommended by the manufacturer of HeliosTM

Gene Gun

System (Biorad, Hercules, CA). The tubing coated with gold was cut into 0.5-inch

segments. Thus, each segment contains 0.5 mg gold and 2.5 µg of reporter DNA. All animal experiments were performed according to the ARVO resolution on

the use of animals in vision research. New Zealand white rabbits (about 2 kg) were

anesthetized with ketamine (30 mg/kg) and xylazine (3 mg/kg). One drop of 0.5 %

proparacaine/HCl was applied to cornea.30

Back hair was clipped and residual hair was

removed by treatment with NAIR (Carter-Wallace, NY). The Gene Gun was held against corneas, conjunctivas and skin to bombard gold particles into tissues, 1 delivery

per individual cornea, 2 deliveries onto opposite sites of individual conjunctiva, and up

to 12 sites on the skin of individual rabbits. Samples were collected 48 h after delivery

and subjected to further experiments.

(7)

Excised tissue specimens were minced with a razor blade, and 0.5 ml of extraction

buffer (0.25 M Tris-HCl, pH 7.4, 0.1 % Tween 20) was added. The samples were

subjected to 3 freeze-thaw cycles, 5 min on dry ice and 5 min at 37°C. The supernatants were collected by centrifugation at 13,ooo x g, 4°C for 10 min.

Assays of β-galactosidae Activity and Whole mount β-galactosidase Histochemical Staining

Aliquots of supernatant were incubated in a 0.3 ml mixture containing 50 mM

2-mercaptoethanol, 1 mM MgCl2, 1.33 mg/ml o-nitrophenyl β-galactopyranoside and 0.1 M phosphate buffer, pH 7.0 at 37°C for 1 to 5 h. 0.7 ml of 1 M Na2CO3 was added to terminate the reaction. The enzyme activity was determined by comparing the optical

density at 460 nm to that of purified β-galactosidase (Boehringer and Mannheim, Indianapolis, IN). The promoter activity of KB reporter gene constructs was calculated

as a fold-increase of the promoter-less pNASSβ construct.

The whole eye ball was enucleated, fixed immediately with 4%

paraformaldehyde in PBS at 4°C for 2hr, and then washed three times with PBS at 4°C. Staining was carried out at 30°C for 16 hr in a solution of

5-bromo-4-chloro-3-indolyl-β-galactopyronoside (X-gal, Sigma) at a final concentration of 0.4 mg/ml made from a 40 mg/ml stock in dimethylformamide, with 4 mM K3Fe(CN)6, 4 mM

K4Fe(CN)6.6H2O, 2 mM MgCl2 in PBS. After staining, eyeballs were rinsed with PBS and photographed as whole mounts.

(8)

Prepar ation of Nuclear Extr acts

Nuclear extracts were prepared as described by Andrews and Faller.31

Briefly, bovine

corneal epithelialcells were scraped into ice-cold PBS, and homogenized in lysis buffer

(0.1% Titon X-100). Then homogenized solution was purified through 1.8 M sucrose

cushion at 24,000 rpm for 45 mins, and the pellet was resuspended in cold buffer (20

mM HEPES-KOH, pH 7.9, 25% glycerol, 420 mM NaCl, 1.5 mM MgCl2, 0.2 mM

EDTA, 0.5 mM dithiothreitol, 0.2 mM PMSF). Then, it was homogenized with

dounce-glass homogenizer, and incubated on ice for 20 min. Cellular debris was

removed by centrifugation for 2 min at 4 °C. Then the supernatant fraction, containing

nuclear DNA-binding proteins, was precipitated by 0.39 g/ml of NH4 OH at 34,000 rpm

for 25 mins and stored in aliquots at 70 °C.

DNase I Footpr inting Aanalysis.

Four DNA probes (-332 bp to –109 bp, -394 bp to –131 bp, -599 bp to –375 bp, -1415

bp to –1394 bp) were prepared with polymerase chain reaction by four pairs of primers

(Table 2), and labeled with [γ-32P] ATP by T4 polynucleotide kinase at the 5'-end. They were incubated with crude nuclear extracts (75 µg) from bovine corneal epithelial cells as previously described.32 A 50 µl mixture containing 10 mM Tris (pH 8), 5 mM MgCl2, 5 mM CaCl2, 50 mM KCl, 500 nM dithiothreitol, 0.05 mg/ml bovine serum albumin,

(9)

15 minutes. The mixture was incubated for additional 45 minutes with 100,000 CPM of

DNA probe before DNase I digestion for 1 minutes and 30 seconds at 25 o C with

variable amount of DNase I. The DNase I digestion was stopped with 50 µl of stop buffer (0.2 M NaCl, 30 mM ethylenediaminetetraacetic acid, 1% sodium dodecyl

sulfate, and 0.1 mg/ml yeast tRNA). Digested DNA probes were purified by phenol

extraction and ethanol precipitation and separated on 6.5% denatured polyacrylamide

gels. Dried gels were exposed to Kodak XAR film with intensifying screens for 24

hours at –80 o

C. G and G+A sequencing reactions were performed to determine the

positions of the protected regions. Negative control reactions (probe) were performed

in the absence of nuclear protein extracts. Region protected by nuclear proteins and

numbers indicating nucleotide positions relative to the transcription start site of the K12

gene.

Electrophoretic Mobility Shift Assays.

Gel-shift analysis of different region of Krt1.12 promoter was performed with 20000

CPM of 32

P-labeled double-stranded synthetic oligonucleotide probe (-182 bp to –111

bp, -256 bp to –293 bp, –942 bp to –913 bp, -1661 bp to –1624 bp, and –1887 bp to –

1858 bp) (Table 3), and crude nuclear extracts prepared from bovine corneal epithelial

cells as described. Twenty microliters of binding reaction mixtures contained 10 µg of

(10)

mM HEPES (pH 7.9), 10% glycerol, 4 mM Tris (pH 8.0), 1 mM

ethylenediaminetetraacetic acid, 0.3 mg/ml bovine serum albumin, 1mM dithiothreitol,

0.1 mg/ml poly(dAdT), and 60 mM KCl. Each labeled probe was competed with an

excess of the same unlabeled, double-stranded synthetic oligomer. Binding mixtures

were separated on a nondenaturing 5% polyacrylamide gel and exposed to Kodak XAR

(11)

Results

Functional Analysis of the 5' -Flanking Region of the Krt1.12 Gene

To identify cis-acting regulatory elements in the 5'-flanking region of the Krt1.12 gene,

we constructed a series of 5' deletionβ-gal expression vectors and transiently transfected them into rabbit conneal, conjunctival, and cutaneous epithelia by gene

guns. The promoter activities of the various constructs obtained from 6 independent

experiments in rabbit corneal epithelial cells are summarized in Fig. 1. Data obtained

from β-gal activities of skins and conjunctivas (the same constructs as in Fig.1) were not significantly different from the activity of pNASSβ in conjunctival and cutaneous epithelia (data not shown).

The activity of pNASSβconstruct was assigned a relative level of 1.0. As described above, 5.0 kb, 2.5 kb, and 2.0 kb fragments displayed similar β-gal activities, and were significantly more than the activity of pNASSβ (Student’s t-test, p<0.05). Deletions of 445, 645, and 845 bp from –975 bp to 3’ end respectively did significantly

lower β-gal activities of 2.0 kb constructs (Student’s t-test, p<0.05). 5' deletion of 402 and 600 bp from –1014 bp to 5’end in 2.5 kb constructs resulted in further decreasing in

β-gal activity compared with (Student t-test, p<0.05), suggesting the presence of a enhancer-like element(s) between 1613 bp and 1014 bp, especially from –1416 bp

(12)

from –2015 bp to –1014 bp, rescued some β-gal activities (Sudent’s t-test, p<0.05). These results suggested that the region between 2015 bp and 1613 bp contains a

silencer-like element(s).

We further tested three constructs, 527 bp to +40 bp, -327 bp to +40 bp and

127 bp to +40 bp (Fig. 2), to determine whether the presence of tissue-specific elements

existed between –527 bp to +40 bp of Krt1.12 promoter. We found that the 0.2 kb

construct, -127 bp to +40 bp, did not express the tissue specificity (Fig 2. and Fig. 3A).

However, the tissue specificity could be found in 0.4 kb (-327 bp to +40 bp) and 0.6 kb

constructs (- 527 bp to +40 bp) (Fig. 2, Fig 3B. and Fig 3C). We suggested that there

might be a tissue-specific element(s) in the region from –327 bp to +40 bp.

DNase I Footpr inting Assay

Four probes (-1415 bp to –1167 bp , -599 to-375 bp, -394 bp to –131 bp, and –331 bp

to –109 bp) were used to identify the possible transcriptional factor binding sites

according to results functional analysis in the promoter of krt1.12 gene. There was two

continuous binding regions from –182 bp to –110 bp and from –256 bp to –193 bp

could be found in the DNase I binding assays (Fig.4). There was no binding site could

be found in another two probes (~-1415 bp to –1167 bp, -599 bp to-375 bp). From these

(13)

for some fundamental promoter activities of Krt1.12 gene, but this region was not for

the tissue specificity. However, the fragment form –256 bp to –193 bp might play an

important role of tissue specificity, and could also be found the constructs longer than

0.4 KB (-375 bp to +40 bp).

Electrophoretic Mobility Shift Assays (EMSA)

To characterize transcription factors that interact with the binding sites in the Krt1.12

promoter, EMSAs was performed. Synthetic oligonucleotides used in EMSAs (Table 3)

were designed from the regions protected by nuclear proteins. EMSA of site from –182

to -111 and –256 to –193 showed binding complex with nuclear proteins from nuclear

proteins of corneal epithelial cells, but the band could also be detected with nuclear

proteins from retinal cells (Fig. 5) This complex was competed and eliminated by a

400- or 800-fold molar excess of the unlabeled oligonucleotides termed self-competitor.

These results suggested that there were several transcriptional factors acting with

oliogonucleotides and regulating the tissue specificity of Krt1.12 promoter.

In the regard of PAX-6 elements, three segments of synthetic probe

corresponding to the –942 bp to –913 bp, -1661 bp to –1624 bp, and -1887 bp to –1858

bp respectively, were used to test the EMSAs. We observed that the first segment gave

a nonspecific binding with nuclear extracts, the second segment could bind the nuclear

(14)
(15)

Discussion

A 0.4 kb Kr t1.12 Pr omoter can expr ess Cor neal Specificity

In this paper, we showed those constructs including 5.0 kb, 2.5 kb, 2.0 kb, 0.6 kb, 0.4 kb,

and 0.2 kb of Krt1.12 promoter displayed similar activities on corneal epithelial cells

(Fig. 1 and Fig. 2). Except the 0.2 kb construct, all of them expressed minimal activities

on conjunctival and cutaneous epithelial cells. This result strongly suggests that a 0.2

kb of Krt1.12 promoter can efficiently express the promoter activities in epithelial cells

and is consistent with our previous findings.30

However, this 0.2 kb construct could not

display corneal specificity (Fig. 2 and Fig. 3). The corneal specificity could only occur

in constructs longer than 0.2 kb. We further used deletion constructs to confirm the

tissue specificity. When we deleted 0.4 kb, 0.6 kb, and 0.8 kb from 1.0 kb in a 2.0 kb of

Krt1.12 construct, we observed that the promoter activities decreased gradually and the

corneal specificity disappeared in the 0.8 kb deletion construct (Fig. 1 and Fig 3). This

further confirmed the region from 0.2 kb to 0.4 kb could regulate the expression of

corneal specificity and implied there also exists some enhancer elements from 0.2 kb to

1.0 kb.

DNase I Footpr inting and EMSAs

To further elucidate the actual transcriptional binding sites in these regions, DNase I

(16)

to –193 bp and –182 bp to –111 bp) could be protected by nuclear extracts and these

two fragments could also be confirmed by EMSAs. However we also found that retinal

nuclear extracts could also bind both segments. Combining above data, we suggested

that these two segments might be responsible for the expression of corneal tissue

specificity and the sequence proximal to 3’ end of these regions played a role in the

regulation of Krt1.12 promoter activity in epithelial cells.

By searching the Gene Bank (NCBI GenBank database, Blast web client

software), we found that there were eight possible transcriptional factor binding sites

including AP-1 (-240 bp to –250 bp), VPB (-229 bp to -238 bp), CP-2 (-211 bp to -221

bp), S8 (-158 bp to -174 bp), GFI1 (-114 bp to -138 bp), AP1 (-124 bp to -133 bp),

DELTAFF1 (-125 bp to -136 bp), AP4 (-113 bp to -122 bp) binding site in sense

direction of these areas. In the antisense orientation, we also found there were eleven

possible transcriptonal binding sites including AP4 (-113 bp to -122 bp), PADS (-123

bp to -132 bp), OCT1 (-128 bp to -153 bp), CEBPB (-133 bp to -147 bp), OCT1 (-119

bp to -133 bp), CATA-1 218 bp to -231 bp), CEBP 226 bp to -243 bp), CEBP B

(-229 bp to -242 bp), GKLF (-234 bp to -248 bp), BARBIE (-236 bp to -251 bp), and

GKLF (-239 bp to -253 bp) binding sites. From these binding sites, we speculated that

the regulation of Krt1.12 promoter in the expression of corneal specificity is the result

(17)

by previous studies of other cytokeratin genes.21;22

Among these transcriptional factors, AP-1 (activation protein 1) was well known

to be a regulator of many cytokeratin genes including K1, K3, K5, K8, K10, and K18.6 33-37

The regulation may be a basal activity or response to stimuli, e.g. calcium, vitamin

D, and steroid hormone, through the protein kinase C (PKC) or mitogen activated

protein kinase (MAPK) pathways.38-42

But the roles of other transcriptional factors in

the regulation of cytokeratin gene were still unknown.

Form the deletion analysis, we suggested that there were enhancer element(s)

from –975 bp to –534 bp and –1416 bp to –1014 bp. Probes (-1415 bp to –1167 bp and

-599 bp to-375 bp) were also performed to study the binding with nuclear extracts, but

we still could not find any protection region in these probes. We don’t know what kind

of transcriptional factors in these areas due to too broad to be analyzed by specific

probes in EMSAs. But from our previous studies, we found that co-transfection of

Pax-6 cDNA with K12 promoter-β-gal constructs result in 4-fold increase of β-gal activities.30

Other studies also demonstrated that Pax-6 played an important role in the

regulation of eye-specific gene in lens, iris epithelium, and retina.43-45

We constructed

three probes as described above for EMSAs. We found that the probe from –1661 bp

to –1624 bp, which contains two Pax-6 binding sites, could specifically bind the corneal

(18)

epithelium, but also can be expressed in other ocular tissue.46

We suggested that this

Pax-6 segment enhanced the promoter activity of K12 gene, but might be not involved

in the regulation of corneal specificity.

In conclusion, we found the upstream sequence (-182 bp to –111 bp and –256 bp

to –193 bp) of Krt1.12 promoter contains the capability to regulate the corneal

specificity. A minimal 110 bp (0.2 kb) of Krt1.12 promoter can efficiently drive the

basal activity in corneal and conjunctival epithelial cells. The regulation of corneal

specificity might be from corporation of several transciptional factors. The Pax-6

(19)

Table 1. Plasmid Constructs Used in Gene Gun Assay and Probes Used for Footprinting K12 Promoter Length (bp) Deletion Sequence (bp) Sense Primer Antisense Primer 5.0 KB (-5034~-+40) 2.5 KB (–2501 ~ +40) 2.0 KB (–2001 ~ +40) 0.6 KB (–527 ~ +40) GGAATTCCC AGATGCTCTC AGAGCC TTTGCACCA CCACCGGA T 0.4 KB (–327 ~ +40) GGAATTCCTT CGGGAAGGA TTCCTTA TTTGCACCA CCACCGGA T 0.2 KB (–127 ~ +40) GGAATTCCTC ACATACCTGC TGAGCT TTTGCACCA CCACCGGA T 2 KB 1.0-0.6 KB (–2001 ~ +40) (–975 ~ -534) 2 KB 1.0-0.4 KB (–2001 ~ +40) (–975 ~ -334) 2 KB 1.0-0.2 KB (–2001 ~ +40) (–975 ~ -134) 2.5 KB 1.4-1.0KB (–2501 ~ +40) (–1416 ~ -1014) GGAAGAAAT AACCAGGAC AGGGGCTGG AG GTAAGAAA TACCCAGG ACAGGGGC TGGAG 2.5 KB 1.6-1.0 KB (–2501 ~ +40) (–1613 ~ -1014) GGAAGAAAT AACCAGGAC AGGGGCTGG GAAAGAAA ACCCAGGA TCAAACAG ACTGGC 2.5 KB 1.8-1.0 KB (–2501 ~ +40) (–1826 ~ -1014) GGAAGAAAT AACCAGGAC AGGGGCTGG TGTAAATAT ATGCCTGG GAAGCACC AGCAA 2.5 KB 2.0-1.0 KB (–2501 ~ +40) (–2015 ~ -1014) GGAAGAAAT AACCAGGAC AGGGGCTGG ACTGACATC AGTTCCCAT GTTCCTGCT GT

(20)

Table 2. Primers Used for Dnase I Footprinting

Probe Length (bp) Sense Primer Antisense Primer -1415~-1167 CCCCTGTCCTG GGTATTTCTTA GAGAGTTGGTCTCA AGGTCAGT -599~-375 ACTTCCAAACA GCTGGCTC CGGTTCAGTATAAG CCAACC -394~-131 GGTTGGCTTATA CTGAACCG TGCATCGTGAAAAT TCACTG -331~-109 GGCTTCGGGAA GGATCCTT CCAGCTCAGCAGGT ATGTGA

(21)

Table 3. Probes for Electrophoretic Motility Shift Assays

Probe Length (bp) Sequence

-256~-193 ACTGAAGGTGACAGATTCCTTACGACAGCCTA TCTGCTCCACCCAGCCTTCTTTCTTGTGTGTC -182~-111 TGGTAATGGTTATTCGATTATAGCTATATCAGTGAAT TTTCACGATGCATAAATCACATACCTGCTGAGCTG Pax 6 (-1887~-1858) AAATGAGGCAAGTGGATTGCAGACTGTGT Pax 6 (-1661~-1624) TTTTCAAACACTTTCCCAGGGTCAGGAACA Pax 6 (-942~-913) CGTTTTATTAAATTCCTGTGAATTCTTTGG

(22)

Figure 1. SV 40 SD/S A SV 40 Poly A+ 2.5 KB 2.0 KB/1.0-0.6 1.0 KB 2.0 KB/1.0-0.4 2.0 KB 2.0 KB/1.0-0.2 2.5 KB 2.0 KB 5.0 KB Lac Z Lac Z Lac Z Lac Z Lac Z Lac Z 5.0 KB KB β-gal Activity (x 10-5 U/ Sample) Fold of Increase 271.49 ± 31.50 276.46 ± 25.50 298.57 ± 37.21 231.99 ± 35.80 201.51 ± 37.34 177.26 ± 12.08 5.55 5.65 6.10 4.74 4.12 3.62 2.5 KB/1.4-1.0 2.5 KB/1.6-1.0 2.5 KB/1.8-1.0 2.5 KB/2.0-1.0 Lac Z Lac Z Lac Z Lac Z 122.96 ± 21.71 117.89 ± 25.46 143.25 ± 16.06 156.77 ± 21.71 2.51 2.41 2.93 3.26 1.2 KB pNASSβ Lac Z 48.91± 3.09 1

(23)

Figure 2.

0.2-0.4 KZ

0

100

200

300

400

500

pNASS-beta

0.2 KZ

0.4 KZ

0.6 KZ

Constructs

β

-gal activity 10

-5

U/Sample

Skin

Conjunctiva

Cornea

(24)

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數據

Table 1. Plasmid Constructs Used in Gene Gun Assay and Probes Used for Footprinting K12 Promoter Length (bp) Deletion Sequence (bp) Sense Primer AntisensePrimer 5.0 KB (-5034~-+40) 2.5 KB (–2501 ~ +40) 2.0 KB (–2001 ~ +40) 0.6 KB (–527 ~ +40) GGAATTCCC AGA
Table 2. Primers Used for Dnase I Footprinting
Figure 1. SV 40 SD/S A SV 40PolyA+ 2.5 KB 2.0 KB/1.0-0.6 1.0 KB 2.0 KB/1.0-0.42.0 KB 2.0 KB/1.0-0.2 2.5 KB 2.0 KB5.0 KB Lac ZLac ZLac ZLac ZLac Z Lac Z5.0 KBKB β-gal Activity (x 10 -5U/ Sample) Fold of Increase271.49 ± 31.50276.46 ± 25.50298.57 ± 37.21231.
Figure 2. 0.2-0.4 KZ 0 100 200 300 400 500pNASS-beta0.2 KZ0.4 KZ0.6 KZConstructs

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