• 沒有找到結果。

(4.193);其他被活化的基因包括 Homo sapiens U5 snRNP-specific protein, 116KD(U5-116KD)mRNA;Myosin VI 等;其下調(Down)的基 因中,最受抑制的是;Aquaporin 6(4.193),kidney specific;其他包 括 Ribosomal protein S17;ALEX1protein 等。

(2)標準化,標準化組受到活化上調的基因中,表量最大的基因是 ME1;AARS;

GGCX;RPP2;UBA2;CHUK 等。標準化組下調基因中最受抑制的是 NAPK14 等。

6、以作用機轉而言,以未標準化實驗組 對照組(DADS/DMSO)的 Ratio of mean 數值來分析基因受到 DADS 活化(up)或抑制(down):以 Apoptosis 而言,

上調基因(>2.0)有 DAP-1(2.25),TRIP9(2.07)。下調基因有 Apaf-1(0.48)、

Bf1-1(0.42)、BCL2-related(0.39)、Daxx(0.38)、DENN(0.32)。DAP-1(2.25)

是 Apoptosis 基因,BCL2-related(0.39)及 DENN(0.32)是 Anti-Apoptosis,

即大蒜素 DADS 對於大腸癌細胞株 Colo 205 的細胞分裂調控,有一部份是透 過 Apoptosis 的作用,而且是經由促進凋亡基因(DAP-1)的活化及抑制抗凋 亡基因(BCL2 及 DENN)的共同參與作用來完成達到殺死 Colo 205 癌細胞,如 圖 25-2730,47,即大蒜素 DADS 會經由活化 Apoptosis 的基因(DAP-1)及抑制 抗 Apoptosis 的基因(BCL2 及 DENN)共同作用,而造成大腸癌細胞株的死 亡。

7、經由 cDNA microarray 晶片數值,DADS 可能通過調控癌相關基因表達以及通 過阻抑癌細胞周期進程程等途徑來抑制大腸細胞株 Colo 205 癌細胞增殖,

誘導抑制癌細胞分化及凋亡。有多個基因參與了大蒜素 DADS 毒殺 Colo 205 的作用,這些基因如同雨後春筍,長短不一,其公用有向上增生及向下抑制 調控功能的不同作用,除了 Apoptosis 的基因外,其他如 Oncogene 抑癌基 因(rho G 0.24);V-ral simian leukemia viral oncogene homolog B (ras related;GTP binding)(0.2),表現多受到抑制,相對的抑制大腸細胞株 Colo 205 癌細胞增殖。

8、未標準化及標準化(normalization)的基因表現個體及表現量及 ratio of

(DADS/DMSO)的數值,是會因標準化及為標準化此二種不同的統計方法,

而呈現不同的結果,因此,以後如何二者取其一,是否全部標準化,以求比 較客觀方法,仍是以後必須繼續探討的問題。

9、Cy5(紅光)635nm 和 Cy3(綠光)532nm 實驗會因結合標識的螢光染劑不同,

而有不同結果,實際必須互相交換做兩次,才不會有因結合不同染劑而造成 誤差,但因目前 Microarray 晶片仍偏貴,且因限於經費,因此未能多做幾 次,以後如有更多的時間及經費,將繼續從事此方面的研究。

10、凋亡基因(Apoptosis)及抗凋亡基因(Anti-Apoptosi)共同參與 DADS 調控 Colo 205 細胞株的作用,中間還包括 p5326,29,61。凋亡基因及抗凋亡基因的共 同拮抗作用,就如同日月對於萬物生長的調控,亦猶如中醫的陰陽對於人的 體質生長之調控。二者相互消長,促使萬物生長平衡,永保健康,也就是內 經所謂【陰平陽秘,有為乃治】,陰陽調和,恰猶如凋亡基因及抗凋亡基因 互相拮抗,以維持細胞的穩定,不致癌化。其他有關實際臨床上 DADS 對人 體癌症治療的效果及機轉,仍有待日後進一步探討。

參考文獻

1. 陳光偉:大蒜成份 DAS 和 DADS 對大腸癌細胞 NAT 活性和抑制大腸癌細胞株 成長的研究,中國醫藥學院中國醫學研究所博士論文 1998; 5:142.

2.黃俊銘:薑黃素對於人類大腸腫瘤細胞株(COLO-205)的影響,中國醫藥學 院中西醫結合研究所碩士論文 2002;6:86.

3.李時珍 :本草綱目 ,國立中國醫藥研究所 台北,1975 pp.489

4.吳國海:中醫藥基因體研究與微陣列及基因表現分析技術,國科會基因體醫 學國家型科技計畫微陣列及基因體表現分析核心設備實驗室,2002;12:74.

5.蘇進成:龍葵粗抽物對人類胃癌細胞株(SC-M1)的影響,中國醫藥學院中西 醫結合研究所碩士論文 2001;6:61.

6.蔡文廷:DNA 微陣列分析六味地黃丸和桂附八味丸培養腎細胞株基因表達之不 同,中國醫藥學院中西醫結合研究所碩士論文 2001;6:46.

7.謝長奇:補益方劑及活性成分致癌細胞凋亡,及其對荷瘤老鼠之免疫調節作 用,中國醫藥學院中國藥學研究所藥學博士論文 2002;7:137.

8.游恆懿:以基因晶片分析經熱藥培養的腎細胞基因,中國醫藥學院中西醫結 合研究所碩士論文 2002;6:46.

9.游志勤:研究大腸癌患者尿中胜? 的變化,中國醫藥學院中西醫結合研究所 碩士論文 2001;7:66.

10.趙學敏 : 本草綱目拾遺 ,人民衛生出版社 北京 1963 pp.184.

11.陳健尉:基因微陣列分析系統,國立台灣大學醫院九十一年度暑期「醫藥基 因生物技術研究班」 2002; 7:62.

12.顧銀娜 : 大蒜有效成分的提取及藥理作用。2000; 1 2(4):25-29.

13.凌 暉 : 大蒜抑制實驗性前胃鱗癌及癌前病變的研究 . 衡 陽 醫 學 院 學 報.2000; 28(1):3-4.

14.唐瞻貴: 大蒜治療口腔癌前病變的電子探針顯微分析. 湖南醫科大學學 報.2002 5(3 ):231-232.

15.胡聰 : 大蒜的抗菌抗癌与免疫激發作用的研究進展. 新疆中醫藥 2000;1 8( 2):62-63.

16.姚逸 : 大蒜的開發利用研究概況. 基層中藥雜志. 2000;14( 6):47-48.

17.高艷景 : 大蒜素抑制人肝癌細胞中VEGFmRNA表達的研究. 中國藥

理學通報.2001; 1 7(5) :53 1-533.

18.李勇 : 大蒜素對人胃腺癌BGC - 82 3 細胞影響的研究. 中國中西醫結合 外科雜志 2001; 7(5):307-310.

19.俞超芹 : 大蒜素對卵巢癌細胞株HO891 0 生長的抑制作用. 安徽中醫學院

Molecular Biology of the Cell. 2002 ; 23 : 1313-1351.

27.Alizadeh AA, Ross DT, Perou CM, van de Rijn M. : Towards a novel classification of human malignancies based on gene expression patterns。J. Pathol. , 2001; 195(1): 41-52. Review.

.

28.Bates MD, Erwin CR, Sanford LP, Wiginton D, etc. : Novel genes and functional relationships in the adult mouse gastrointestinal tract identified by microarray analysis 。 Gastroenterology. 2002 May;

122(5):1467-82.

29.Benjamin Lewin. Oncogenes and cancer. Gene Ⅶ. 2000;6 : 835-875.

30.Biocata Company http://www.biocarta.com/

31.Buck J.S Allicin, the antibacterial principle of Allium sativum, Determination of the chemical stucture 。1996 Soc. 66 : 1952-1958.

32.Belanan S : Onion and garlic inhibit tumor pro motion。Carcinogenesis 1983 1063-1084.

33.Chang BD, Swift ME, Shen M, Fang J, Broude EV, Roninson IB. : Molecular determinants of terminal growth arrest induced in tumor cells by a chemotherapeutic agent。Proc. Natl. Acad. Sci. U S A , 2002 ;99(1):

389-94.

34.Conacci-Sorrell ME, Ben-Yedidia T, Shtutman M, Feinstein E, Einat P, Ben-Ze'ev A.: Nr-CAM is a target gene of the beta-catenin/LEF-1 pathway in melanoma and colon cancer and its expression enhances motility and confers tumorigenesis。Genes Dev. 2002;16(16):2058-72.

35.Favis R, Barany F.: Mutation detection in K-ras, BRCA1, BRCA2, and p53 using PCR/LDR and a universal DNA microarray。Ann N Y Acad. Sci., 2000 ; 906:39-43. Review.

36.Frank F. Bier : Feature-size limitations of microarray technology-a critical review。Fresenius. J. Anal. Chem. 2001; 371:151-156.

37.Frantz DJ, Hughes BG, Nelson DR, Murray BK, Christensen MJ.: Cell cycle arrest and differential gene expression in HT-29 cells exposed to an aqueous garlic extract。Nutr. Cancer. 2000 ; 38(2):255-64.

38.Frederic Devaux :Transcriptomes, transcription activators and microarrays。FEBS Letters, 2001; 498:140-144.

39.Fujita M, Furukawa Y, Tsunoda T, Tanaka T, Ogawa M, Nakamura Y. : Up-regulation of the ectodermal-neural cortex 1 (ENC1) gene, a downstream target of the beta-catenin/T-cell factor complex, in colorectal carcinomas 。 Cancer Res. 2001 ; 61(21):7722-6.

40.Getz G, Levine E, Domany E. : Coupled two-way clustering analysis of gene microarray data。Proc. Natl. Acad. Sci U S A. 2000 ; 97(22):12079-84.

41.Guda K, Cui H, Garg S, Dong M, Nambiar PR, Achenie LE, Rosenberg DW. : Multistage gene expression profiling in a differentially susceptible mouse colon cancer model。Cancer Lett. 2003; 191(1):17-25.

42.Gupta RA, Brockman JA, Sarraf P, Willson TM, DuBois RN. : Target genes of peroxisome proliferator-activated receptor gamma in colorectal cancer cells。J.Biol. Chem. 2001 ; 276(32):29681-7.

43.Hendriks Y, Franken P, Dierssen JW, De Leeuw W, Wignen J, Dreef E, Tops C, Breuning M, Brocker-Vriends A, Vasen H, Fodde R, Morreau

H.:Conventional and tissue microarray immunohistochemical expression analysis of mismatch repair in hereditary colorectal tumors。Am. J.

Pathol. 2003 ;162(2):469-77.

44.Huang X, Pan W. : Comparing three methods for variance estimation with duplicated high density oligonucleotide arrays 。 Funct. Integr.

Genomics. 2002 ; 2(3):126-33.

45.Huerta S, Harris DM, Jazirehi A, Bonavida B, Elashoff D, Livingston EH, Heber D. : Gene expression profile of metastatic colon cancer cells resistant to cisplatin-induced apoptosis。Int. J. Oncol. 2003 ;22(3):663-70.

46.Hung-Ching Liu : Application of complementary DNA microarray (DNA chip) technology in the study of gene expression profiles during folliculogenesis。FERTILITY AND STERILITY 2001 ; 75(5):947-955.

47. KEGG: Kyoto Encyclopedia of Genes and Genomes.

http://www.genome.ad.jp/kegg/

48.Iizaka M, Furukawa Y, Tsunoda T, Akashi H, Ogawa M, Nakamura Y. : Expression profile analysis of colon cancer cells in response to sulindac or aspirin。Biochem. Biophys. Res. Commun. 2002 ; 292(2):498-512.

49.Kato T, Satoh S, Okabe H, Kitahara O, Ono K, Kihara C, Tanaka T, Tsunoda T, Yamaoka Y, Nakamura Y, Furukawa Y. : Isolation of a novel human gene MARKL1 homologous to MARK3 and its involvement in hepatocellular carcinogenesis. Neoplasia. 2001;3(1):4-9.

50.Kirschner M, Pujol G, Radu A.: Oligonucleotide microarray data mining:

search for age-dependent gene expression。Biochem. Biophys. Res. Commun.

2002 ; 298(5):772-8.

51.Knudsen steen : A Biologist’s Guide to analysis of DNA microarry data.

Technical University of Denmark. 2002; 20-96.

52.Kulkarni AV, Williams NS, Lian Y, Wren JD, Mittelman D, Pertsemlidis A, Garner HR. ARROGANT: An application to manipulate large gene collections。Bioinformatics 2002 ;18(11):1410-7.

53.Lee HM, Greeley GH Jr, Englander EW. : Age-associated changes in gene expression patterns in the duodenum and colon of rats。Mech. Ageing.

Dev. 2001 ; 122(4):355-71.

54.Li L, Weinberg CR, Darden TA, Pedersen LG. : Gene selection for sample classification based on gene expression data: study of sensitivity to choice of parameters of the GA/KNN method 。 Bioinformatics 2001 Dec;17(12):1131-42.

55.Lin YM, Furukawa Y, Tsunoda T, Yue CT, Yang KC, Nakamura Y. Molecular diagnosis of colorectal tumors by expression profiles of 50 genes expressed differentially in adenomas and carcinomas 。 Oncogene 2002 ;21(26):4120-8.

56.M.Cuzin : DNA chips: a new tool for genetic analysis and diagnostics。

Transfus. Clin. Biol. 2001; 8 : 291-6.

57.Mariadason JM, Arango D, Corner GA, Aranes MJ, Hotchkiss KA, Yang W, Augenlicht LH. : A gene expression profile that defines colon cell maturation i n vitro。Cancer Res. 2002 ; 62(16):4791-804.

61.Mark Schena : Microarrays: biotechnology’s discovery platform for functional genomics。TIBTECH , 1998 ;16 :301-306.

58.McLachlan GJ, Bean RW, Peel D. : A mixture model-based approach to the clustering of microarray expression data。Bioinformatics. 2002 Mar;

18(3):413-22.

59.Nakeff A, Sahay N, Pisano M, Subramanian B.: Painting with a molecular brush: genomic/proteomic interfacing to define the drug action profile

of novel solid-tumor selective anticancer agents。Cytometry. 2002 Jan 1; 47(1):72-9.

60.Nambiar PR, Giardina C, Guda K, Aizu W, Raja R, Rosenberg DW. : Role of the alternating reading frame (P19)-p53 pathway in an in vivo murine colon tumor model。Cancer Res. 2002 ; 62(13):3667-74.

61.Narayanan BA, Narayanan NK, Reddy BS. : Docosahexaenoic acid regulated genes and transcription factors inducing apoptosis in human colon cancer cells 。Int. J. Oncol. 2001; 19(6): 1255-62.

62.Nguyen DV, Rocke DM. : Tumor classification by partial least squares using microarray gene expression data 。 Bioinformatics. 2002;

18(1):39-50.

63.Nur T, Peijnenburg AA, Noteborn HP, Baykus H, Reifen R. : DNA microarray technology reveals similar gene expression patterns in rats with vitamin a deficiency and chemically induced colitis。J. Nutr. 2002 Aug;

132 (8):2131-6.

64.Otsuka M, Kato M, Yoshikawa T, Chen H, Brown EJ, Masuho Y, Omata M, Seki N. : Differential expression of the L-plastin gene in human colorectal cancer progression and metastasis 。 Biochem. Biophys. Res. Commun.

2001 ;289(4):876-81.

65.Paul S Meltzer : Spotting the target microarrays for disease gene discovery 。 Current Opinion in Genetics & Development ,2001;11:258-263.

66.Rampal J B.: DNA Aarrays methods and protocols . Library of congress 2001 ; 15-189.

67.Roland Jurecic : Long-distance DD-PCR and cDNA microarrays。Current Opinion in Microbiology, 2000; 3:316-321.

68. Sundaram S. G : Impact of organosulfur components in garlic on canine mammary tumor cells in culture。Cancer Left, 1993 pp.105.

69.Sanders G.H.W. : Chip-based Microsystems for genomic and proteomic analysisTrends in analytical chemistry, 2000 ; 19 : 364-376.

70.Scheffer GL, de Jong MC, Monks A, Flens MJ, Hose CD, Izquierdo MA, Shoemaker RH, Scheper RJ. : Increased expression of beta 2-microglobulin in multidrug-resistant tumour cells。Br. J. Cancer. 2002; 86(12):1943-50.

71.Schraml P, Kononen J, Bubendorf L, Moch H, Bissig H, Nocito A, Mihatsch MJ, Kallioniemi OP, Sauter G. : Tissue microarrays for gene amplification surveys in many different tumor types。Clin. Cancer Res. 1999; 5(8):

1966-75.

72.Soeth E, Wirth T, List HJ, Kumbhani S, Petersen A, Neumaier M, Czubayko F, Juhl H. : Controlled ribozyme targeting demonstrates an antiapoptotic effect of carcinoembryonic antigen in HT29 colon cancer cells。Clin.

Cancer. Res. 2001 ;7(7):2022-30.

73.Soumya Raychaudhuri : Basic microarray analysis: grouping and feature reduction。TRENDS in Biotechnology 2001;19(5): 189-193.

74.Sreekumar A, Nyati MK, Varambally S, Barrette TR, Ghosh D, Lawrence TS, Chinnaiyan AM. : Profiling of cancer cells using protein microarrays: discovery of novel radiation-regulated proteins。Cancer Res. 2001 ;61(20):7585-93.

75.Stremmel C, Wein A, Hohenberger W, Reingruber B. : DNA microarrays: a new diagnostic tool and its implications in colorectal cancer。Int. J.

Colorectal Dis. 2002;17(3):131-6. Review.

76.Takahashi Y, Ishii Y, Nagata T, Ikarashi M, Ishikawa K, Asai S. : Clinical application of oligonucleotide probe array for full-length gene sequencing of TP53 in colon cancer。Oncology, 2003;64(1):54-60.

77.Thomas Kodadek : Protein microarrays: prospects and problems。125p.

78.Timothy R Hughes: DNA microarrays for expression profiling。P46-90.

79.Tsodikov A, Szabo A, Jones D.: Adjustments and measures of differential expression for microarray data。Bioinformatics 2002 ; 18(2):251-60.

80.Tsutomu Yoshikawa : lsolation of Novel Mouse Genes Differentially Expressed in Brain Using cDNA Microarray。Biochemical and Biophysical Research Communications, 2000; 275:532-537.

81.Wang HP, Hanlon JG, Rainbow AJ, Espiritu M, Singh G.: Up-regulation of Hsp27 plays a role in the resistance of human colon carcinoma HT29 cells to photooxidative stress。Photochem Photobiol. , 2002; 76(1): 98-104.

82.Zhang H, Yu CY, Singer B, Xiong M.: Recursive partitioning for tumor classification with gene expression microarray data。Proc Natl Acad Sci U S A. 2001; 98(12): 6730-5.

83.Zhang K, Zhao H.: Assessing reliability of gene clusters from gene expression data。Funct Integr Genomics. 2000 Nov;1(3):156-73.

84.Zimmer R, Thomas P.: Expression profiling and interferon-beta regulation of liver metastases in colorectal cancer cells 。 Clin Exp Metastasis.,2002;19(6):541-50.

85.Zou TT, Selaru FM, Xu Y, Shustova V, Yin J, Mori Y, Shibata D, Sato F, Wang S, Olaru A, Deacu E, Liu TC, Abraham JM, Meltzer SJ. : Application of cDNA microarrays to generate a molecular taxonomy capable of distinguishing between colon cancer and normal colon 。 Oncogene, 2002;Jul

18;21(31):4855-62.

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