第 4 章 討論
4.4. 結論
本研究針對納豆菌漆酶CotA laccase 在大腸桿菌異源表現系統內僅能以胞 內生產的限制予以改良,並探討利用訊號序列 (signal peptide) 修飾目標基因 及調整胞膜間區 (periplasmic space) 釋放條件等方式,外泌生產納豆菌漆酶的 可行性。研究結果顯示,納豆菌漆酶CotA laccase 在重組大腸桿菌內,毋需額 外修飾其它訊號序列,即能自然轉移至胞膜間區累積,此一現象有助於外泌生 產技術的開發。因此,進一步利用 glycine/Triton X-100 釋放法,並調整採用
「誘導」與「釋放」分開處理的方式,再搭配以醱酵槽進行細胞高密度培養策 略,建構了一個兼顧異源蛋白質「大量表現」及「高效釋放」的大腸桿菌外泌 生產模式,以此方式培養後於胞外釋放之納豆菌漆酶活性可達5.72 U/mL。較 原先胞內表現、並以超音波破菌的方式所得活性,提高近170 倍。故本研究所 建構的大腸桿菌外泌生產模式,除有效改善傳統破菌方式造成的能源耗費,對 於酵素工業化製程的簡化及生產成本的降低亦有所助益。
圖表
表 1 聚合酶連鎖反應引子
引子名稱 序列(5’-3’)
cotA-hlyA-1 TCCCCATAAAGCCTATGGAAGTCAGGGTAATCTTAATCCATTAATTAATGAAATCAGC
cotA-hlyA-2 AAATTACCTGCAGCTGAAATGATTTTGCTGATTTCATTAATTAATGGATTAAGAT
cotA-hlyA-3 AAATCATTTCAGCTGCAGGTAATTTTGATGTTAAAGAGGAAAGAGCTGCAGC
cotA-hlyA-4 GCATTACCGGACAACTGCAATAAAGAAGCTGCAGCTCTTTCCTCTTTAA
cotA-hlyA-5 TGCAGTTGTCCGGTAATGCCAGTGATTTTTCATATGGACGGAACTCAATAAC
cotA-hlyA-6 TTATTATGCTGATGCTGTCAAAGTTATTGAGTTCCGTCCATATG
pQE→cotA GCATGCGAGCTCGGTACCCCAATGACACTTGAAAAATTTGTGG
hlyA←pQE GCTTGGCTGCAGGTCGACCCTTATTATGCTGATGCTGTCAAAG
cotA→hlyA TCCCCATAAAGCCTATGGAAGTC
cotA←hlyA TTCCATAGGCTTTATGGGGATCAGTTATATCC
TorAF1 ATGAACAATAACGATCTCTTTCAGGCATCAC
TorAR1 CCCAGCAGATACGGCAGGAAC
AmiAF1 ATGAGCACTTTTAAACCACTAAAAACACTC
AmiAR1 AGTGGAAATAACTGATCACGCCTTC
MalEF1 ATGAAAATAAAAACAGGTGCACG
MalER1 ACTTCAGCGCTACGGCACCC
OmpAF1 ATGAAAAAGACAGCTATCGCGATT
OmpAF2 TCGATCTCTACGCGACGATCC
A-TorA-cotA CGAGCTCGGTACCCCAATGAACAATAACGATCTCTTTC
A-AmiA-cotA CGAGCTCGGTACCCCAATGAGCACTTTTAAACCAC
A-MalE-cotA CGAGCTCGGTACCCCAATGAAAATAAAAACAGGTGCAC
A-OmpA-cotA CGAGCTCGGTACCCCAATGAAAAAGACAGCTATCGC
cotA-6His GCTGCAGGTCGACCCTTAGTGATGGTGATGGTGATGTTTATGGGGATCAGTTATATCC
表 2 在 E. coli M15/pQE-30 Xa 系統中,修飾不同訊號序列之 cotA laccase 表現情 形
Induction
temp. hlyA torA amiA malE ompA cotA only
Vector only
Medium 25°C ND ND ND ND ND ND ND
37°C ND ND ND ND ND ND ND
Cell 25°C - ND ND ND ND 32.8 ND
37°C - ND ND ND ND ND ND
單位:mU/mL ND:Not detected
分別以hlyAsp、torAsp、amiAsp、malEsp 及 ompAsp 修飾之 cotA 基因於 E. coli M15/pQE-30 Xa 系統表現,並偵測不同誘導條件下,胞內 (超音波破菌) 及胞 外漆酶活性表現情形。
僅未修飾訊號序列的組別,經超音波破菌後測得胞內漆酶活性32.8 mU/mL。
圖 1 在 E. coli M15/pQE 30-Xa 系統修飾不同訊號序列,對納豆菌漆酶於胞膜間 區累積的影響
分別以torAsp、amiAsp、malEsp 及 ompAsp 修飾之 cotA 基因於 E. coli M15/pQE-30 Xa 系統表現,並以冷滲透休克法分離胞膜間區蛋白質,並檢測該區域漆酶 活性表現情形。
未修飾訊號序列的組別於胞膜間區累積活性均較有修飾組別為高,為 93.4±
1.09 mU/mL。
0 20 40 60 80 100 120
torAsp amiAsp malEsp ompAsp cotA only
Laccase activity (mU/mL)
圖 2 在 E. coli BL21 (DE3)/pEXP-5CT/TOPO® 系統中,IPTG 濃度及溫度等誘導 因子,對含不同訊號序列之納豆菌漆酶,於胞膜間區累積的影響
分別以torAsp、amiAsp 及 malEsp 修飾之 cotA 基因於 E. coli BL21 (DE3)/pEXP-5CT/TOPO®系統表現,並以冷滲透休克法分離胞膜間區蛋白質,並檢測該區
圖 3 在 E. coli BL21 (DE3)/pEXP-5CT/TOPO®-C (TOPO-C) 誘導培養時,同時添 加不同濃度Glycine 或 Triton X-100,對於納豆菌漆酶釋放至胞外的影響 TOPO-C 於 500 mL Hinton’s flask 以 37°C 振盪培養至 OD600=0.8-1.0 後加入 0.05 mM IPTG 及 0.25 mM CuSO4以25°C 誘導,同時添加不同濃度 Glycine 或Triton X-100 進行釋放,並觀察胞外漆酶活性表現情形。
Glycine 或 Triton X-100 的最適添加濃度均為 2% (w/v),所釋放至胞外的漆酶 活性分別為38.44±1.85 及 9.85±0.418 mU/mL。
0 5 10 15 20 25 30 35 40 45
0.5 1 2 5
Glycine Triton X-100
Laccase activity (mU/mL)
Glycine/Triton X-100 concentration (%, w/v)
cotA vector - + + + - + + +
2% Glycine&
Triton X-100 - - + - - - + -
Cold osmotic
shock - - - + - - - +
圖 4 SDS-PAGE 膠體電泳及活性染色分析在 E. coli BL21 (DE3)/ pEXP-5CT/TOPO®-C (TOPO-C),胞外釋放 CotA laccase 情形
無cotA vector 者為未轉形質體之 E. coli BL21(DE3)對照組。經 Glycine/Triton X-100 釋放 (編號 3),或以冷滲透休克法處理 (編號 4) 組別,於 40 kDa 可見 活性反應條帶。
M 1 2 3 4 1 2 3 4 M (kDa)
圖 5 E. coli BL21 (DE3)/ pEXP-5CT/TOPO®-C (TOPO-C) 誘導時同時添加 2%
Glycine 及 Triton X-100 後,納豆菌漆酶活性隨誘導時間釋放至胞外的變化 情形
TOPO-C 於 500 mL Hinton’s flask 以 37°C 振盪培養至 OD600=0.8-1.0 後加入 0.05 mM IPTG 及 0.25 mM CuSO4以25°C 誘導,同時添加 2% Glycine 及 Triton X-100 進行釋放,並以此為 0 點,定點取樣觀察胞外漆酶活性隨誘導及釋放 處理時間變化情形。
胞外漆酶活性於誘導、釋放後16 小時最高,為 224.7±11.6 mU/mL。
0 50 100 150 200 250 300
0 4 8 12 16 20 24
Laccase activity (mU/mL)
Time after induction (hr)
0 8 16 24 32 0
2 4 6 8 10 12 14
2% Glycine 2% Triton X -100
2% Glycine and Triton X -100
圖 6 E. coli BL21 (DE3)/ pEXP-5CT/TOPO®-C (TOPO-C) 經誘導並濃縮 10 倍後,
再經釋放處理之胞外漆酶活性,隨釋放時間變化情形
100 mL TOPO-C 於 500 mL Hinton’s flask 以 37°C 振盪培養至 OD600=0.8-1.0 後 加入0.05 mM IPTG 及 0.25 mM CuSO4以25°C 誘導 16 小時後離心並以 10 mL LB 培養基回溶菌體,再添加 2% Glycine、2% Triton X-100 以及 2% Glycine 和 Triton X-100 進行釋放,並以此為 0 點,定點取樣觀察胞外漆酶活性隨釋放處 理時間變化情形。
以2% Glycine 和 Triton X-100 共同處理所釋放漆酶效率最高,處理 32 小時後 活性達10.56±0.068 U/mL。
Laccase activity (U/mL)
Time after release treatment (hr)
20160531 pH stat batch
參考文獻
1. Mergulhao, F.J., Summers, D.K., and Monteiro, G.A., Recombinant protein secretion in Escherichia coli. Biotechnol Adv, 2005. 23(3): p. 177-202.
2. Gentschev, I., Dietrich, G., and Goebel, W., The E. coli alpha-hemolysin secretion system and its use in vaccine development. Trends Microbiol, 2002.
10(1): p. 39-45.
3. Yoon, S.H., Kim, S.K., and Kim, J.F., Secretory production of recombinant proteins in Escherichia coli. Recent Pat Biotechnol, 2010. 4(1): p. 23-9.
4. Lee, P.A., Tullman-Ercek, D., and Georgiou, G., The bacterial twin-arginine translocation pathway. Annu Rev Microbiol, 2006. 60: p. 373-95.
5. Palmer, T. and Berks, B.C., The twin-arginine translocation (Tat) protein export pathway. Nat Rev Microbiol, 2012. 10(7): p. 483-96.
6. Choi, J.H., Keum, K.C., and Lee, S.Y., Production of recombinant proteins by high cell density culture of Escherichia coli. Chem Eng Sci, 2006. 61(3): p. 876-885.
7. Sletta, H., et al., The presence of N-terminal secretion signal sequences leads to strong stimulation of the total expression levels of three tested medically
important proteins during high-cell-density cultivations of Escherichia coli.
Appl Environ Microbiol, 2007. 73(3): p. 906-12.
8. Su, L., et al., Extracellular overexpression of recombinant Thermobifida fusca cutinase by alpha-hemolysin secretion system in E. coli BL21(DE3). Microb Cell Fact, 2012. 11: p. 8.
9. Choi, J.H. and Lee, S.Y., Secretory and extracellular production of recombinant proteins using Escherichia coli. Appl Microbiol Biotechnol, 2004. 64(5): p. 625-35.
10. Yang, J., et al., One hundred seventy-fold increase in excretion of an FV fragment-tumor necrosis factor alpha fusion protein (sFV/TNF-alpha) from Escherichia coli caused by the synergistic effects of glycine and triton X-100.
Appl Environ Microbiol, 1998. 64(8): p. 2869-74.
11. Gerard, F., Angelini, S., and Wu, L.F., Export of Thermus thermophilus cytoplasmic beta-glycosidase via the E. coli Tat pathway. J Mol Microbiol Biotechnol, 2002. 4(6): p. 533-8.
12. Yoshida, H., LXIII.—Chemistry of lacquer (Urushi). Part I. Communication from the Chemical Society of Tokio. J. Chem. Soc., Trans., 1883. 43: p. 472-486.
13. 劉秀美、蔡馥嚀,農業廢棄物生產木質分解酵素之研究;農業生技產業季
14. Bao, W., et al., A laccase associated with lignification in loblolly pine xylem.
Science, 1993. 260(5108): p. 672-672.
15. Sato, Y., et al., Molecular Cloning and Expression of Eight Laccase cDNAs in Loblolly Pine (Pinus taeda)*. J Plant Res, 2001. 114(2): p. 147-155.
16. Dittmer, N.T., et al., Characterization of cDNAs encoding putative laccase-like multicopper oxidases and developmental expression in the tobacco hornworm, Manduca sexta, and the malaria mosquito, Anopheles gambiae. Insect Biochem Mol Biol, 2004. 34(1): p. 29-41.
17. Giardina, P., et al., Laccases: a never-ending story. Cell Mol Life Sci, 2010.
67(3): p. 369-385.
18. Hullo, M.-F., et al., CotA of Bacillus subtilis is a copper-dependent laccase. J Bacteriol, 2001. 183(18): p. 5426-5430.
19. Claus, H., Laccases: structure, reactions, distribution. Micron, 2004. 35(1–2): p.
93-96.
20. Enguita, F.J., et al., Crystal structure of a bacterial endospore coat component.
A laccase with enhanced thermostability properties. J Biol Chem, 2003.
278(21): p. 19416-25.
21. Kumar, S.V., et al., Combined sequence and structure analysis of the fungal laccase family. Biotechnol Bioeng, 2003. 83(4): p. 386-94.
22. Abadulla, E., et al., Decolorization and detoxification of textile dyes with a laccase from Trametes hirsuta. Appl Environ Microbiol, 2000. 66(8): p. 3357-62.
23. Mayer, A.M. and Staples, R.C., Laccase: new functions for an old enzyme.
Phytochemistry, 2002. 60(6): p. 551-565.
24. Hong, F., Meinander, N.Q., and Jönsson, L.J., Fermentation strategies for improved heterologous expression of laccase in Pichia pastoris. Biotechnol Bioeng, 2002. 79(4): p. 438-449.
25. Guan, Z.B., et al., Efficient secretory production of CotA-laccase and its application in the decolorization and detoxification of industrial textile wastewater. Environ Sci Pollut Res Int, 2015. 22(12): p. 9515-23.
26. Kunst, F., et al., The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature, 1997. 390(6657): p. 249-256.
27. Amaha, M. and Sakaguchi, K.-I., Effects of carbohydrates, proteins, and bacterial cells in the heating media on the heat resistance of Clostridium sporogenes. J Bacteriol, 1954. 68(3): p. 338-345.
28. Bhat, A.R., et al., Bacillus subtilis natto: a non-toxic source of poly-γ-glutamic acid that could be used as a cryoprotectant for probiotic bacteria. AMB
Express, 2013. 3(1): p. 36.
29. Ogawa, Y., et al., Efficient Production of γ-polyglutamic acid by bacillus subtilis (natto) in jar fermenters. Biosci Biotechnol Biochem, 2014. 61(10): p. 1684-1687.
30. Ashiuchi, M., et al., Rapid purification and plasticization of d-glutamate-containing poly-γ-glutamate from Japanese fermented soybean food natto. J Pharm Biomed Anal, 2015. 116: p. 90-93.
31. Hosoi, T., et al., Improved growth and viability of lactobacilli in the presence of Bacillus subtilis (natto), catalase, or subtilisin. Can J Microbiol, 2000. 46(10):
p. 892-897.
32. Samanya, M. and Yamauchi, K.E., Histological alterations of intestinal villi in chickens fed dried Bacillus subtilis var. natto. Comp Biochem Physiol A Mol Integr Physiol, 2002. 133(1): p. 95-104.
33. 林軒立,納豆菌漆酶之異源表現 Heterologous expression of laccase gene from Bacillus subtilis natto. 國立臺灣大學微生物與生化學研究所碩士論 文,2010。
34. Peccoud, J., Gene synthesis: methods and protocols. Methods Mol. Biol. Vol.
852. 2012.
35. Miller, G.L., Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem, 1959. 31(3): p. 426-428.
36. Mohammadian, M., et al., Enhanced expression of a recombinant bacterial laccase at low temperature and microaerobic conditions: purification and biochemical characterization. J Ind Microbiol Biotechnol, 2010. 37(8): p. 863-869.
37. Hu, S.-Y., Wu, J.-L., and Huang, J.-H., Production of tilapia insulin-like growth factor-2 in high cell density cultures of recombinant Escherichia coli. J
Biotechnol, 2004. 107(2): p. 161-171.
附錄
附錄1 大腸桿菌 (Escherichia coli) -hemolysin 蛋白質外泌機制 [1]
附錄2 枯草桿菌 (Bacillus subtilis) 漆酶 CotA 與銅離子結合位置關係 [20]
附錄3 表現載體 pQE-30 Xa 圖譜
載體上 Multiple cloning site (MCS) 可供外源基因插入;6xHis 為 Histidine tag,供純化蛋白質標記;Ampicillin 抗性基因可供篩選轉形成功菌株。圖譜 載自 QIAGEN 公司網站 (www.qiagen.com)。
附錄4 表現載體 pEXP5-CT/TOPO® 圖譜
載體上 TOPO® recognition site 供外源基因插入;6xHis 為 Histidine tag,供 純化蛋白質標記;Ampicillin 抗性基因可供篩選轉形成功菌株。圖譜載自 Invitrogen 公司網站 (www.invitrogen.com)。
附錄 5 本研究使用之訊號序列
附錄6 本研究使用相關培養基及試劑配方
Separating gel (per 10 mL) Stacking gel (per 5 mL)
A solution 4.15 mL 0.66 mL
5× non-reducing SDS sample buffer (per 100 mL)
Tris 3.03 g
EDTA 0.18 g
Glycerol 50 g
Bromophenol Blue 0.05 g
*pH 6.8, Store at 4°C
10× TGS buffer (per 1 L)
Tris 30.28 g
Glycine 114.13 g
SDS 10 g
*pH 8.3
CBR dye reagent (per 550 mL)
Coomassie brilliant blue R-250 0.75 g
Acetate 50 mL
Methanol 250 mL
H2O 250 mL
De-staining buffer (per 1L)
Acetate 100 mL Methenol 200 mL
H2O 700 mL
Laccase reaction buffer
ABTS 0.5 mM
NaOAC 50 mM
CuSO4 0.25 mM
*pH 4.5
Modified R medium (per liter) [37]
Citric acid 3 g
Nutrient solution (per liter) [33]
Citric acid 3 g KH2PO4 6.75 g (NH4)SO4 5 g Na2HPO4 1.18 g
MgCl2 5 g
NH4Cl 0.1 g Glucose 750 g Yeast extract 50 g
Trace metal solution (per mL of 5M HCl) [37]
FeSO4‧7H2O 10 mg ZnSO4‧7H2O 2.25 mg CaCl2‧H2O 1.35 mg MnSO4‧5H2O 0.5 mg CuSO4‧5H2O 1 mg AlCl6‧H2O 0.3 mg (NH4)6Mo7O24 0.1 mg H3BO3 0.2 mg Thiamine-HCl 2 mg
*Trace metal solution is sterilized by filtration